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数学与系统科学研究院 [5]
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期刊论文 [19]
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Environmental and molecular regulation of diapause formation in a scyphozoan jellyfish
期刊论文
MOLECULAR ECOLOGY, 2023, 页码: 13
作者:
Li, Yongxue
;
Xu, Pengzhen
;
Sun, Tingting
;
Peng, Saijun
;
Wang, Fanghan
收藏
  |  
浏览/下载:3/0
  |  
提交时间:2024/01/26
Aurelia coerulea
diapause formation
jellyfish bloom
podocyst
single-cell RNA sequencing
hDirect-MAP: projection-free single-cell modeling of response to checkpoint immunotherapy
期刊论文
BRIEFINGS IN BIOINFORMATICS, 2022, 卷号: 23, 期号: 2, 页码: 16
作者:
Lu, Yong
;
Xue, Gang
;
Zheng, Ningbo
;
Han, Kun
;
Yang, Wenzhong
收藏
  |  
浏览/下载:13/0
  |  
提交时间:2023/02/07
single-cell RNA sequencing (scRNA-seq)
single-cell mass cytometry (CyTOF)
Pareto optimization
projection-free single-cell modeling
response to immune checkpoint blockade
An Efficient and Universal Protoplast Isolation Protocol Suitable for Transient Gene Expression Analysis and Single-Cell RNA Sequencing
期刊论文
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2022, 卷号: 23, 期号: 7
作者:
Wang, Juanjuan
;
Wang, Yang
;
Lu, Tianfeng
;
Yang, Xia
;
Liu, Jing
收藏
  |  
浏览/下载:0/0
  |  
提交时间:2024/03/07
protoplast isolation
cell walls
Chirita pumila
protocol
transient gene expression
single-cell RNA sequencing
Transcriptome Regulation by Oncogenic ALK Pathway in Mammalian Cortical Development Revealed by Single-Cell RNA Sequencing
期刊论文
CEREBRAL CORTEX, 2021, 卷号: 31, 期号: 8, 页码: 3911-3924
作者:
Mao, Rui
;
Zhang, Xiaoyun
;
Kong, Youyong
;
Wu, Shanshan
;
Huo, Hai-qin
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  |  
浏览/下载:34/0
  |  
提交时间:2021/08/17
anaplastic lymphoma kinase
cerebral organoid
neurodevelopment
neural progenitor cell
single-cell RNA sequencing
Transcriptome landscape of double negative T cells by single-cell RNA sequencing
期刊论文
JOURNAL OF AUTOIMMUNITY, 2021, 卷号: 121, 页码: 15
作者:
Yang, Lu
;
Zhu, Yanbing
;
Tian, Dan
;
Wang, Song
;
Guo, Jincheng
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  |  
浏览/下载:32/0
  |  
提交时间:2021/12/01
Double negative T cell
Single-cell RNA sequencing
Unconventional T cells
Inflammation
Regulatory T cells
Innate immunity
A kernel non-negative matrix factorization framework for single cell clustering
期刊论文
APPLIED MATHEMATICAL MODELLING, 2021, 卷号: 90, 页码: 875-888
作者:
Jiang, Hao
;
Yi, Ming
;
Zhang, Shihua
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  |  
浏览/下载:9/0
  |  
提交时间:2021/04/26
Single cell RNA-sequencing
Kernel non-negative matrix factorization
Cellular heterogeneity
NeuralEE: A GPU-Accelerated Elastic Embedding Dimensionality Reduction Method for Visualizing Large-Scale scRNA-Seq Data
期刊论文
FRONTIERS IN GENETICS, 2020, 卷号: 11, 页码: 8
作者:
Xiong, Jiankang
;
Gong, Fuzhou
;
Wan, Lin
;
Ma, Liang
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  |  
浏览/下载:20/0
  |  
提交时间:2021/01/14
single-cell RNA sequencing
elastic embedding
neural networks
large-scale
stochastic optimization
parametric models
generalizable models
Single-cell RNA sequencing of t(8;21) acute myeloid leukemia for risk prediction
期刊论文
ONCOLOGY REPORTS, 2020, 卷号: 43, 期号: 4, 页码: 1278-1288
作者:
Xiong, Qian
;
Huang, Sai
;
Li, Yong-Hui
;
Lv, Na
;
Lv, Chao
收藏
  |  
浏览/下载:57/0
  |  
提交时间:2020/12/10
acute myeloid leukemia
t(8
21)
single-cell RNA-sequencing
prognosis
Comparison of Computational Methods for Imputing Single-Cell RNA-Sequencing Data
期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2020, 卷号: 17, 期号: 2, 页码: 376-389
作者:
Zhang, Lihua
;
Zhang, Shihua
收藏
  |  
浏览/下载:32/0
  |  
提交时间:2020/05/24
Gene expression
Sequential analysis
Bioinformatics
RNA
Matrix converters
Computational biology
Bayes methods
Single-cell RNA-sequencing technique
dropout event
imputation
algorithm
bioinformatics
Multiplexed, Sequential Secretion Analysis of the Same Single Cells Reveals Distinct Effector Response Dynamics Dependent on the Initial Basal State
期刊论文
ADVANCED SCIENCE, 2019, 卷号: 6, 期号: 9, 页码: 11
作者:
Chen, Zhuo
;
Lu, Yao
;
Zhang, Kerou
;
Xiao, Yang
;
Lu, Jun
收藏
  |  
浏览/下载:55/0
  |  
提交时间:2019/06/20
heterogeneity
macrophage activation
sequential analysis
single-cell cytokine assay
single-cell RNA sequencing
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